GEP::CellPopulation< IndividualType, Comparator > Class Template Reference

CellPopulation of < GEP::Individual >. Manages the selection of Individuals according to cellular process. More...

#include <CellPopulation.h>

Inheritance diagram for GEP::CellPopulation< IndividualType, Comparator >:

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Collaboration diagram for GEP::CellPopulation< IndividualType, Comparator >:

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List of all members.

Public Member Functions
	CellPopulation (const std::string &path)
void	runGeneration ()
void	runBasicGEPGeneration ()
void	evaluate (const typename IndividualType::eval_type &user_param=typename IndividualType::eval_type(0), const bool &elite=false)
void	fitness (const bool &elite=false)
void	readConfig (const std::string &path)
Private Member Functions
u_short	randomNeighbor (const u_short &idx)
void	randomNeighbors (const u_short &idx, std::pair< u_short, u_short > &n_pair)
void	cellularSelection ()
Private Attributes
u_short	_dx
u_short	_dy
std::vector< std::pair< short, short > >	_neighborhood
smallGen	_rng_neighbor

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Detailed Description

template<class IndividualType, template< class IndividualType > class Comparator = IndividualGT>
class GEP::CellPopulation< IndividualType, Comparator >

CellPopulation of < GEP::Individual >. Manages the selection of Individuals according to cellular process.

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Constructor & Destructor Documentation

template<class IndividualType , template< class IndividualType > class Comparator>

GEP::CellPopulation< IndividualType, Comparator >::CellPopulation

(

const std::string &

path

)

[inline]

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Member Function Documentation

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::cellularSelection

(

)

[inline, private]

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::evaluate	(	const typename IndividualType::eval_type &	user_param = typename IndividualType::eval_type(0),
		const bool &	elite = false
	)			[inline, virtual]

Runs evaluation for all elements in population, with user_param as target case

Parameters:

	user_param	- desired output
	elite	- if true, elite will be evaluated as well

Reimplemented from GEP::Population< IndividualType, Comparator >.

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::fitness

(

const bool &

elite = false

)

[inline, virtual]

Calcualtes fitness for all elements in population.

Parameters:

elite

- if true, fitness will be calculated for elite as well

Reimplemented from GEP::Population< IndividualType, Comparator >.

template<class IndividualType , template< class IndividualType > class Comparator>

u_short GEP::CellPopulation< IndividualType, Comparator >::randomNeighbor

(

const u_short &

idx

)

[inline, private]

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::randomNeighbors	(	const u_short &	idx,
		std::pair< u_short, u_short > &	n_pair
	)			[inline, private]

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::readConfig

(

const std::string &

path

)

[inline, virtual]

Parses config file for fields specific to the Population

Reimplemented from GEP::Population< IndividualType, Comparator >.

template<class IndividualType , template< class IndividualType > class Comparator = IndividualGT>

void GEP::CellPopulation< IndividualType, Comparator >::runBasicGEPGeneration

(

)

[inline, virtual]

Performs operators on the population in the following sequence:

Warning:

Assumes that population is evaluated!

> elitism (choose _eliteSize best individuals; for Ferreira _eliteSize = 1)
1) Create temporary population through:
> selection
2) Apply individual operators
> one individual operators (mutation and IS, RIS, Gene transpositions)
> two individual operators (one point, two point and gene crossovers)
> elitism, continued - replace _eliteSize first individuals with the elite ones.
3) Replace the population with temporary one
4) Replace _eliteSize first individuals with _elite

Reimplemented from GEP::Population< IndividualType, Comparator >.

template<class IndividualType , template< class IndividualType > class Comparator>

void GEP::CellPopulation< IndividualType, Comparator >::runGeneration

(

)

[inline, virtual]

Will base on the neighborhood. Assumes, that individuals are evaluated, and their fitness - calculated.

Reimplemented from GEP::Population< IndividualType, Comparator >.

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Member Data Documentation

template<class IndividualType , template< class IndividualType > class Comparator = IndividualGT>

u_short GEP::CellPopulation< IndividualType, Comparator >::_dx [private]

x dimension of the lattice

template<class IndividualType , template< class IndividualType > class Comparator = IndividualGT>

u_short GEP::CellPopulation< IndividualType, Comparator >::_dy [private]

y dimension of the lattice

template<class IndividualType , template< class IndividualType > class Comparator = IndividualGT>

std::vector< std::pair<short,short> > GEP::CellPopulation< IndividualType, Comparator >::_neighborhood [private]

Neighborhood of a point; contains series of coordinates for a neighborhood on lattice of size nxm, such so coordinate c = n*x+m

template<class IndividualType , template< class IndividualType > class Comparator = IndividualGT>

smallGen GEP::CellPopulation< IndividualType, Comparator >::_rng_neighbor [private]

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The documentation for this class was generated from the following file:

• CellPopulation.h